Index

_

__add__() (biocutils.NamedList.NamedList method) (biocutils.Names.Names method) __annotations__ (biocutils.FloatList.FloatList attribute) (biocutils.IntegerList.IntegerList attribute) (biocutils.NamedList.NamedList attribute) (biocutils.StringList.StringList attribute) __copy__() (biocutils.Factor.Factor method) (biocutils.NamedList.NamedList method) (biocutils.Names.Names method) __deepcopy__() (biocutils.Factor.Factor method) (biocutils.NamedList.NamedList method) (biocutils.Names.Names method) __eq__() (biocutils.Factor.Factor method) (biocutils.NamedList.NamedList method) (biocutils.Names.Names method) __getitem__() (biocutils.Factor.Factor method) (biocutils.NamedList.NamedList method) (biocutils.Names.Names method) (biocutils.normalize_subscript.NormalizedSubscript method)

__hash__ (biocutils.Factor.Factor attribute) (biocutils.NamedList.NamedList attribute) (biocutils.Names.Names attribute) __iadd__() (biocutils.NamedList.NamedList method) (biocutils.Names.Names method) __iter__() (biocutils.Factor.Factor method) (biocutils.Factor.FactorIterator method) (biocutils.NamedList.NamedList method) (biocutils.Names.Names method) __len__() (biocutils.Factor.Factor method) (biocutils.NamedList.NamedList method) (biocutils.Names.Names method) (biocutils.normalize_subscript.NormalizedSubscript method) __next__() (biocutils.Factor.FactorIterator method) __repr__() (biocutils.Factor.Factor method) (biocutils.NamedList.NamedList method) (biocutils.Names.Names method) __setitem__() (biocutils.Factor.Factor method) (biocutils.NamedList.NamedList method) (biocutils.Names.Names method)

A

append() (biocutils.NamedList.NamedList method) (biocutils.Names.Names method) as_dict() (biocutils.NamedList.NamedList method) as_list() (biocutils.NamedList.NamedList method) (biocutils.Names.Names method)

assign() (in module biocutils.assign) assign_rows() (in module biocutils.assign_rows) assign_sequence() (in module biocutils.assign_sequence)

B

biocutils module biocutils.assign module biocutils.assign_rows module biocutils.assign_sequence module biocutils.BooleanList module biocutils.combine module biocutils.combine_columns module biocutils.combine_rows module biocutils.combine_sequences module biocutils.convert_to_dense module biocutils.extract_column_names module biocutils.extract_row_names module biocutils.Factor module biocutils.factorize module biocutils.FloatList module biocutils.get_height module biocutils.IntegerList module biocutils.intersect module biocutils.is_high_dimensional module biocutils.is_list_of_type module

biocutils.is_missing_scalar module biocutils.map_to_index module biocutils.match module biocutils.NamedList module biocutils.Names module biocutils.normalize_subscript module biocutils.package_utils module biocutils.print_truncated module biocutils.print_wrapped_table module biocutils.relaxed_combine_columns module biocutils.relaxed_combine_rows module biocutils.reverse_index module biocutils.show_as_cell module biocutils.StringList module biocutils.subset module biocutils.subset_rows module biocutils.subset_sequence module biocutils.union module BooleanList (class in biocutils.BooleanList) build_reverse_index() (in module biocutils.reverse_index)

C

codes (biocutils.Factor.Factor property) combine() (in module biocutils.combine) combine_columns() (in module biocutils.combine_columns) combine_rows() (in module biocutils.combine_rows)

combine_sequences() (in module biocutils.combine_sequences) convert_to_dense() (in module biocutils.convert_to_dense) copy() (biocutils.NamedList.NamedList method) (biocutils.Names.Names method) create_floating_names() (in module biocutils.print_wrapped_table)

D

drop_unused_levels() (biocutils.Factor.Factor method)

E

extend() (biocutils.NamedList.NamedList method) (biocutils.Names.Names method)

extract_column_names() (in module biocutils.extract_column_names) extract_row_names() (in module biocutils.extract_row_names)

F

Factor (class in biocutils.Factor) FactorIterator (class in biocutils.Factor) factorize() (in module biocutils.factorize)

FloatList (class in biocutils.FloatList) from_dict() (biocutils.NamedList.NamedList static method) from_list() (biocutils.NamedList.NamedList static method) from_sequence() (biocutils.Factor.Factor static method)

G

get_codes() (biocutils.Factor.Factor method) get_height() (in module biocutils.get_height) get_levels() (biocutils.Factor.Factor method) get_names() (biocutils.Factor.Factor method) (biocutils.NamedList.NamedList method) get_ordered() (biocutils.Factor.Factor method)

get_slice() (biocutils.Factor.Factor method) (biocutils.NamedList.NamedList method) (biocutils.Names.Names method) get_value() (biocutils.Factor.Factor method) (biocutils.NamedList.NamedList method) (biocutils.Names.Names method)

I

insert() (biocutils.NamedList.NamedList method) (biocutils.Names.Names method) IntegerList (class in biocutils.IntegerList) intersect() (in module biocutils.intersect)

is_high_dimensional() (in module biocutils.is_high_dimensional) is_list_of_type() (in module biocutils.is_list_of_type) is_missing_scalar() (in module biocutils.is_missing_scalar) is_package_installed() (in module biocutils.package_utils)

L

levels (biocutils.Factor.Factor property)

M

map() (biocutils.Names.Names method) map_to_index() (in module biocutils.map_to_index) match() (in module biocutils.match) module biocutils biocutils.assign biocutils.assign_rows biocutils.assign_sequence biocutils.BooleanList biocutils.combine biocutils.combine_columns biocutils.combine_rows biocutils.combine_sequences biocutils.convert_to_dense biocutils.extract_column_names biocutils.extract_row_names biocutils.Factor biocutils.factorize biocutils.FloatList biocutils.get_height biocutils.IntegerList biocutils.intersect biocutils.is_high_dimensional biocutils.is_list_of_type biocutils.is_missing_scalar biocutils.map_to_index biocutils.match biocutils.NamedList biocutils.Names biocutils.normalize_subscript biocutils.package_utils biocutils.print_truncated biocutils.print_wrapped_table biocutils.relaxed_combine_columns biocutils.relaxed_combine_rows biocutils.reverse_index biocutils.show_as_cell biocutils.StringList biocutils.subset biocutils.subset_rows biocutils.subset_sequence biocutils.union

N

NamedList (class in biocutils.NamedList) names (biocutils.Factor.Factor property) (biocutils.NamedList.NamedList property)

Names (class in biocutils.Names) normalize_subscript() (in module biocutils.normalize_subscript) NormalizedSubscript (class in biocutils.normalize_subscript)

O

ordered (biocutils.Factor.Factor property)

P

print_truncated() (in module biocutils.print_truncated) print_truncated_dict() (in module biocutils.print_truncated)

print_truncated_list() (in module biocutils.print_truncated) print_type() (in module biocutils.print_wrapped_table) print_wrapped_table() (in module biocutils.print_wrapped_table)

R

relaxed_combine_columns() (in module biocutils.relaxed_combine_columns) relaxed_combine_rows() (in module biocutils.relaxed_combine_rows)

remap_levels() (biocutils.Factor.Factor method) replace_levels() (biocutils.Factor.Factor method)

S

safe_append() (biocutils.BooleanList.BooleanList method) (biocutils.FloatList.FloatList method) (biocutils.IntegerList.IntegerList method) (biocutils.NamedList.NamedList method) (biocutils.Names.Names method) (biocutils.StringList.StringList method) safe_extend() (biocutils.BooleanList.BooleanList method) (biocutils.FloatList.FloatList method) (biocutils.IntegerList.IntegerList method) (biocutils.NamedList.NamedList method) (biocutils.Names.Names method) (biocutils.StringList.StringList method) safe_insert() (biocutils.BooleanList.BooleanList method) (biocutils.FloatList.FloatList method) (biocutils.IntegerList.IntegerList method) (biocutils.NamedList.NamedList method) (biocutils.Names.Names method) (biocutils.StringList.StringList method) set_codes() (biocutils.Factor.Factor method) set_levels() (biocutils.Factor.Factor method) set_names() (biocutils.Factor.Factor method) (biocutils.NamedList.NamedList method)

set_ordered() (biocutils.Factor.Factor method) set_slice() (biocutils.BooleanList.BooleanList method) (biocutils.Factor.Factor method) (biocutils.FloatList.FloatList method) (biocutils.IntegerList.IntegerList method) (biocutils.NamedList.NamedList method) (biocutils.Names.Names method) (biocutils.StringList.StringList method) set_value() (biocutils.BooleanList.BooleanList method) (biocutils.Factor.Factor method) (biocutils.FloatList.FloatList method) (biocutils.IntegerList.IntegerList method) (biocutils.NamedList.NamedList method) (biocutils.Names.Names method) (biocutils.StringList.StringList method) show_as_cell() (in module biocutils.show_as_cell) StringList (class in biocutils.StringList) subscript (biocutils.normalize_subscript.NormalizedSubscript property) subset() (in module biocutils.subset) subset_rows() (in module biocutils.subset_rows) subset_sequence() (in module biocutils.subset_sequence)

T

to_pandas() (biocutils.Factor.Factor method)

truncate_strings() (in module biocutils.print_wrapped_table)

U

union() (in module biocutils.union)