spatialexperimentΒΆ
- spatialexperiment package
- Subpackages
- Submodules
- spatialexperiment.ProxySFE module
ProxySpatialFeatureExperimentProxySpatialFeatureExperiment.__copy__()ProxySpatialFeatureExperiment.__deepcopy__()ProxySpatialFeatureExperiment.__init__()ProxySpatialFeatureExperiment.__repr__()ProxySpatialFeatureExperiment.annot_geometriesProxySpatialFeatureExperiment.col_geometriesProxySpatialFeatureExperiment.copy()ProxySpatialFeatureExperiment.get_annot_geometries()ProxySpatialFeatureExperiment.get_col_geometries()ProxySpatialFeatureExperiment.get_row_geometries()ProxySpatialFeatureExperiment.get_slice()ProxySpatialFeatureExperiment.get_spatial_graphs()ProxySpatialFeatureExperiment.get_unit()ProxySpatialFeatureExperiment.row_geometriesProxySpatialFeatureExperiment.set_annot_geometries()ProxySpatialFeatureExperiment.set_col_geometries()ProxySpatialFeatureExperiment.set_column_data()ProxySpatialFeatureExperiment.set_row_geometries()ProxySpatialFeatureExperiment.set_spatial_graphs()ProxySpatialFeatureExperiment.set_unit()ProxySpatialFeatureExperiment.spatial_graphsProxySpatialFeatureExperiment.unit
- spatialexperiment.SpatialExperiment module
SpatialExperimentSpatialExperiment.__annotations__SpatialExperiment.__copy__()SpatialExperiment.__deepcopy__()SpatialExperiment.__init__()SpatialExperiment.__repr__()SpatialExperiment.add_img()SpatialExperiment.combine_columns()SpatialExperiment.copy()SpatialExperiment.get_image_data()SpatialExperiment.get_img()SpatialExperiment.get_img_data()SpatialExperiment.get_scale_factors()SpatialExperiment.get_slice()SpatialExperiment.get_spatial_coordinates()SpatialExperiment.get_spatial_coordinates_names()SpatialExperiment.get_spatial_coords()SpatialExperiment.get_spatial_coords_names()SpatialExperiment.image_dataSpatialExperiment.img_dataSpatialExperiment.img_raster()SpatialExperiment.img_source()SpatialExperiment.mirror_img()SpatialExperiment.relaxed_combine_columns()SpatialExperiment.rmv_img()SpatialExperiment.rotate_img()SpatialExperiment.set_column_data()SpatialExperiment.set_image_data()SpatialExperiment.set_img_data()SpatialExperiment.set_spatial_coordinates()SpatialExperiment.set_spatial_coordinates_names()SpatialExperiment.set_spatial_coords()SpatialExperiment.set_spatial_coords_names()SpatialExperiment.spatial_coordinatesSpatialExperiment.spatial_coordinates_namesSpatialExperiment.spatial_coordsSpatialExperiment.spatial_coords_namesSpatialExperiment.to_spatial_experiment()
combine_columns()relaxed_combine_columns()
- spatialexperiment.SpatialImage module
LoadedSpatialImageLoadedSpatialImage.__abstractmethods__LoadedSpatialImage.__copy__()LoadedSpatialImage.__deepcopy__()LoadedSpatialImage.__eq__()LoadedSpatialImage.__hash__()LoadedSpatialImage.__init__()LoadedSpatialImage.__repr__()LoadedSpatialImage.copy()LoadedSpatialImage.get_image()LoadedSpatialImage.imageLoadedSpatialImage.img_raster()LoadedSpatialImage.set_image()
RemoteSpatialImageRemoteSpatialImage.__abstractmethods__RemoteSpatialImage.__annotations__RemoteSpatialImage.__copy__()RemoteSpatialImage.__deepcopy__()RemoteSpatialImage.__eq__()RemoteSpatialImage.__hash__()RemoteSpatialImage.__init__()RemoteSpatialImage.__repr__()RemoteSpatialImage.copy()RemoteSpatialImage.get_url()RemoteSpatialImage.img_raster()RemoteSpatialImage.img_source()RemoteSpatialImage.set_url()RemoteSpatialImage.url
StoredSpatialImageStoredSpatialImage.__abstractmethods__StoredSpatialImage.__annotations__StoredSpatialImage.__copy__()StoredSpatialImage.__deepcopy__()StoredSpatialImage.__eq__()StoredSpatialImage.__hash__()StoredSpatialImage.__init__()StoredSpatialImage.__repr__()StoredSpatialImage.copy()StoredSpatialImage.get_path()StoredSpatialImage.img_raster()StoredSpatialImage.img_source()StoredSpatialImage.pathStoredSpatialImage.set_path()
VirtualSpatialImageVirtualSpatialImage.__abstractmethods__VirtualSpatialImage.__annotations__VirtualSpatialImage.__eq__()VirtualSpatialImage.__hash__()VirtualSpatialImage.__init__()VirtualSpatialImage.dimensionsVirtualSpatialImage.get_dimensions()VirtualSpatialImage.get_metadata()VirtualSpatialImage.img_raster()VirtualSpatialImage.metadataVirtualSpatialImage.mirror_img()VirtualSpatialImage.rotate_img()VirtualSpatialImage.set_metadata()
construct_spatial_image_class()
- Module contents
LoadedSpatialImageLoadedSpatialImage.__abstractmethods__LoadedSpatialImage.__annotations__LoadedSpatialImage.__copy__()LoadedSpatialImage.__deepcopy__()LoadedSpatialImage.__eq__()LoadedSpatialImage.__hash__()LoadedSpatialImage.__init__()LoadedSpatialImage.__repr__()LoadedSpatialImage.copy()LoadedSpatialImage.get_image()LoadedSpatialImage.imageLoadedSpatialImage.img_raster()LoadedSpatialImage.set_image()
ProxySpatialFeatureExperimentProxySpatialFeatureExperiment.__annotations__ProxySpatialFeatureExperiment.__copy__()ProxySpatialFeatureExperiment.__deepcopy__()ProxySpatialFeatureExperiment.__init__()ProxySpatialFeatureExperiment.__repr__()ProxySpatialFeatureExperiment.annot_geometriesProxySpatialFeatureExperiment.col_geometriesProxySpatialFeatureExperiment.copy()ProxySpatialFeatureExperiment.get_annot_geometries()ProxySpatialFeatureExperiment.get_col_geometries()ProxySpatialFeatureExperiment.get_row_geometries()ProxySpatialFeatureExperiment.get_slice()ProxySpatialFeatureExperiment.get_spatial_graphs()ProxySpatialFeatureExperiment.get_unit()ProxySpatialFeatureExperiment.row_geometriesProxySpatialFeatureExperiment.set_annot_geometries()ProxySpatialFeatureExperiment.set_col_geometries()ProxySpatialFeatureExperiment.set_column_data()ProxySpatialFeatureExperiment.set_row_geometries()ProxySpatialFeatureExperiment.set_spatial_graphs()ProxySpatialFeatureExperiment.set_unit()ProxySpatialFeatureExperiment.spatial_graphsProxySpatialFeatureExperiment.unit
RemoteSpatialImageRemoteSpatialImage.__abstractmethods__RemoteSpatialImage.__annotations__RemoteSpatialImage.__copy__()RemoteSpatialImage.__deepcopy__()RemoteSpatialImage.__eq__()RemoteSpatialImage.__hash__()RemoteSpatialImage.__init__()RemoteSpatialImage.__repr__()RemoteSpatialImage.copy()RemoteSpatialImage.get_url()RemoteSpatialImage.img_raster()RemoteSpatialImage.img_source()RemoteSpatialImage.set_url()RemoteSpatialImage.url
SpatialExperimentSpatialExperiment.__annotations__SpatialExperiment.__copy__()SpatialExperiment.__deepcopy__()SpatialExperiment.__init__()SpatialExperiment.__repr__()SpatialExperiment.add_img()SpatialExperiment.combine_columns()SpatialExperiment.copy()SpatialExperiment.get_image_data()SpatialExperiment.get_img()SpatialExperiment.get_img_data()SpatialExperiment.get_scale_factors()SpatialExperiment.get_slice()SpatialExperiment.get_spatial_coordinates()SpatialExperiment.get_spatial_coordinates_names()SpatialExperiment.get_spatial_coords()SpatialExperiment.get_spatial_coords_names()SpatialExperiment.image_dataSpatialExperiment.img_dataSpatialExperiment.img_raster()SpatialExperiment.img_source()SpatialExperiment.mirror_img()SpatialExperiment.relaxed_combine_columns()SpatialExperiment.rmv_img()SpatialExperiment.rotate_img()SpatialExperiment.set_column_data()SpatialExperiment.set_image_data()SpatialExperiment.set_img_data()SpatialExperiment.set_spatial_coordinates()SpatialExperiment.set_spatial_coordinates_names()SpatialExperiment.set_spatial_coords()SpatialExperiment.set_spatial_coords_names()SpatialExperiment.spatial_coordinatesSpatialExperiment.spatial_coordinates_namesSpatialExperiment.spatial_coordsSpatialExperiment.spatial_coords_namesSpatialExperiment.to_spatial_experiment()
StoredSpatialImageStoredSpatialImage.__abstractmethods__StoredSpatialImage.__annotations__StoredSpatialImage.__copy__()StoredSpatialImage.__deepcopy__()StoredSpatialImage.__eq__()StoredSpatialImage.__hash__()StoredSpatialImage.__init__()StoredSpatialImage.__repr__()StoredSpatialImage.copy()StoredSpatialImage.get_path()StoredSpatialImage.img_raster()StoredSpatialImage.img_source()StoredSpatialImage.pathStoredSpatialImage.set_path()
VirtualSpatialImageVirtualSpatialImage.__abstractmethods__VirtualSpatialImage.__annotations__VirtualSpatialImage.__eq__()VirtualSpatialImage.__hash__()VirtualSpatialImage.__init__()VirtualSpatialImage.dimensionsVirtualSpatialImage.get_dimensions()VirtualSpatialImage.get_metadata()VirtualSpatialImage.img_raster()VirtualSpatialImage.metadataVirtualSpatialImage.mirror_img()VirtualSpatialImage.rotate_img()VirtualSpatialImage.set_metadata()
construct_spatial_image_class()read_tenx_visium()