summarizedexperiment

• summarizedexperiment package
  • Submodules
  • summarizedexperiment.BaseSE module
    • BaseSE
      • BaseSE.__copy__()
      • BaseSE.__deepcopy__()
      • BaseSE.__getitem__()
      • BaseSE.__init__()
      • BaseSE.__len__()
      • BaseSE.__repr__()
      • BaseSE.assay()
      • BaseSE.assay_names
      • BaseSE.assays
      • BaseSE.col_data
      • BaseSE.col_names
      • BaseSE.coldata
      • BaseSE.colnames
      • BaseSE.column_data
      • BaseSE.column_names
      • BaseSE.columndata
      • BaseSE.columnnames
      • BaseSE.copy()
      • BaseSE.dims
      • BaseSE.get_assay()
      • BaseSE.get_assay_names()
      • BaseSE.get_assays()
      • BaseSE.get_column_data()
      • BaseSE.get_column_names()
      • BaseSE.get_metadata()
      • BaseSE.get_row_data()
      • BaseSE.get_row_names()
      • BaseSE.get_slice()
      • BaseSE.metadata
      • BaseSE.row_data
      • BaseSE.row_names
      • BaseSE.rowdata
      • BaseSE.rownames
      • BaseSE.set_assay()
      • BaseSE.set_assay_names()
      • BaseSE.set_assays()
      • BaseSE.set_column_data()
      • BaseSE.set_column_names()
      • BaseSE.set_metadata()
      • BaseSE.set_row_data()
      • BaseSE.set_row_names()
      • BaseSE.shape
      • BaseSE.subset_assays()
      • BaseSE.to_anndata()
    • SliceResult
  • summarizedexperiment.RangedSummarizedExperiment module
    • RangedSummarizedExperiment
      • RangedSummarizedExperiment.__annotations__
      • RangedSummarizedExperiment.__copy__()
      • RangedSummarizedExperiment.__deepcopy__()
      • RangedSummarizedExperiment.__init__()
      • RangedSummarizedExperiment.__repr__()
      • RangedSummarizedExperiment.combine_columns()
      • RangedSummarizedExperiment.combine_rows()
      • RangedSummarizedExperiment.copy()
      • RangedSummarizedExperiment.coverage()
      • RangedSummarizedExperiment.end
      • RangedSummarizedExperiment.find_overlaps()
      • RangedSummarizedExperiment.flank()
      • RangedSummarizedExperiment.follow()
      • RangedSummarizedExperiment.get_row_ranges()
      • RangedSummarizedExperiment.get_slice()
      • RangedSummarizedExperiment.narrow()
      • RangedSummarizedExperiment.nearest()
      • RangedSummarizedExperiment.order()
      • RangedSummarizedExperiment.precede()
      • RangedSummarizedExperiment.promoters()
      • RangedSummarizedExperiment.relaxed_combine_columns()
      • RangedSummarizedExperiment.relaxed_combine_rows()
      • RangedSummarizedExperiment.resize()
      • RangedSummarizedExperiment.restrict()
      • RangedSummarizedExperiment.row_ranges
      • RangedSummarizedExperiment.seq_info
      • RangedSummarizedExperiment.seqnames
      • RangedSummarizedExperiment.set_row_ranges()
      • RangedSummarizedExperiment.shift()
      • RangedSummarizedExperiment.sort()
      • RangedSummarizedExperiment.start
      • RangedSummarizedExperiment.strand
      • RangedSummarizedExperiment.subset_by_overlaps()
      • RangedSummarizedExperiment.to_se()
      • RangedSummarizedExperiment.to_summarizedexperiment()
      • RangedSummarizedExperiment.width
    • combine_columns()
    • combine_rows()
    • relaxed_combine_columns()
    • relaxed_combine_rows()
  • summarizedexperiment.SummarizedExperiment module
    • SummarizedExperiment
      • SummarizedExperiment.__annotations__
      • SummarizedExperiment.__init__()
      • SummarizedExperiment.combine_columns()
      • SummarizedExperiment.combine_rows()
      • SummarizedExperiment.relaxed_combine_columns()
      • SummarizedExperiment.relaxed_combine_rows()
      • SummarizedExperiment.to_rangedsummarizedexperiment()
      • SummarizedExperiment.to_rse()
    • combine_columns()
    • combine_rows()
    • relaxed_combine_columns()
    • relaxed_combine_rows()
  • summarizedexperiment.type_checks module
    • is_matrix_like()
  • Module contents