pyexpressionatlas

• pyexpressionatlas package
  • Submodules
  • pyexpressionatlas.api module
    • BioStudiesAPI
      • BioStudiesAPI.__enter__()
      • BioStudiesAPI.__exit__()
      • BioStudiesAPI.__init__()
      • BioStudiesAPI.close()
      • BioStudiesAPI.fetch_experiment_metadata()
      • BioStudiesAPI.search()
  • pyexpressionatlas.client module
    • ExpressionAtlasClient
      • ExpressionAtlasClient.__enter__()
      • ExpressionAtlasClient.__exit__()
      • ExpressionAtlasClient.__init__()
      • ExpressionAtlasClient.__repr__()
      • ExpressionAtlasClient.api
      • ExpressionAtlasClient.close()
      • ExpressionAtlasClient.fetch_experiment_metadata()
      • ExpressionAtlasClient.get_experiment()
      • ExpressionAtlasClient.get_experiments()
      • ExpressionAtlasClient.search_experiments()
  • pyexpressionatlas.download module
    • download_experiment()
    • download_experiments()
    • get_atlas_data()
    • get_atlas_experiment()
    • has_tsv_files()
    • set_cache_dir()
  • pyexpressionatlas.exceptions module
    • APIError
      • APIError.__init__()
    • DownloadError
      • DownloadError.__annotations__
      • DownloadError.__init__()
    • ExpressionAtlasError
      • ExpressionAtlasError.__annotations__
    • InvalidAccessionError
      • InvalidAccessionError.__annotations__
      • InvalidAccessionError.__init__()
  • pyexpressionatlas.models module
    • ExperimentType
      • ExperimentType.ANTIGEN_PROFILING
      • ExperimentType.MICRORNA_PROFILING_ARRAY
      • ExperimentType.PROTEOMIC_PROFILING
      • ExperimentType.RNASEQ_CODING
      • ExperimentType.RNASEQ_NONCODING
      • ExperimentType.RNASEQ_SINGLE_CELL_CODING
      • ExperimentType.RNASEQ_SINGLE_CELL_NONCODING
      • ExperimentType.RNASEQ_TOTAL
      • ExperimentType.TRANSCRIPTION_PROFILING_ARRAY
      • ExperimentType.__format__()
      • ExperimentType.__new__()
      • ExperimentType.__repr__()
      • ExperimentType.get_eligible_types()
      • ExperimentType.is_microarray()
      • ExperimentType.is_rnaseq()
    • SearchResult
      • SearchResult.__annotations__
      • SearchResult.__dataclass_fields__
      • SearchResult.__dataclass_params__
      • SearchResult.__eq__()
      • SearchResult.__hash__
      • SearchResult.__init__()
      • SearchResult.__match_args__
      • SearchResult.__repr__()
      • SearchResult.accession
      • SearchResult.connection_error
      • SearchResult.experiment_type
      • SearchResult.species
      • SearchResult.title
      • SearchResult.to_dict()
    • search_results_to_biocframe()
  • pyexpressionatlas.validation module
    • filter_valid_accessions()
    • is_valid_accession()
    • validate_accession()
  • Module contents