cellarrΒΆ
- cellarr package
- Submodules
- cellarr.CellArrDataset module
CellArrDataset
CellArrDataset.__del__()
CellArrDataset.__getitem__()
CellArrDataset.__init__()
CellArrDataset.__len__()
CellArrDataset.__repr__()
CellArrDataset.get_cell_metadata_column()
CellArrDataset.get_cell_metadata_columns()
CellArrDataset.get_cell_subset()
CellArrDataset.get_gene_annotation_column()
CellArrDataset.get_gene_annotation_columns()
CellArrDataset.get_gene_annotation_index()
CellArrDataset.get_gene_subset()
CellArrDataset.get_matrix_subset()
CellArrDataset.get_sample_metadata_column()
CellArrDataset.get_sample_metadata_columns()
CellArrDataset.get_sample_subset()
CellArrDataset.get_slice()
CellArrDataset.shape
- cellarr.CellArrDatasetSlice module
CellArrDatasetSlice
CellArrDatasetSlice.__annotations__
CellArrDatasetSlice.__dataclass_fields__
CellArrDatasetSlice.__dataclass_params__
CellArrDatasetSlice.__eq__()
CellArrDatasetSlice.__hash__
CellArrDatasetSlice.__init__()
CellArrDatasetSlice.__len__()
CellArrDatasetSlice.__repr__()
CellArrDatasetSlice.cell_metadata
CellArrDatasetSlice.gene_annotation
CellArrDatasetSlice.matrix
CellArrDatasetSlice.shape
CellArrDatasetSlice.to_anndata()
CellArrDatasetSlice.to_summarizedexperiment()
- cellarr.build_cellarrdataset module
- cellarr.build_options module
CellMetadataOptions
CellMetadataOptions.skip
CellMetadataOptions.dtype
CellMetadataOptions.tiledb_store_name
CellMetadataOptions.column_types
CellMetadataOptions.__annotations__
CellMetadataOptions.__dataclass_fields__
CellMetadataOptions.__dataclass_params__
CellMetadataOptions.__eq__()
CellMetadataOptions.__hash__
CellMetadataOptions.__init__()
CellMetadataOptions.__repr__()
CellMetadataOptions.column_types
CellMetadataOptions.dtype
CellMetadataOptions.skip
CellMetadataOptions.tiledb_store_name
GeneAnnotationOptions
GeneAnnotationOptions.feature_column
GeneAnnotationOptions.skip
GeneAnnotationOptions.dtype
GeneAnnotationOptions.tiledb_store_name
GeneAnnotationOptions.column_types
GeneAnnotationOptions.__annotations__
GeneAnnotationOptions.__dataclass_fields__
GeneAnnotationOptions.__dataclass_params__
GeneAnnotationOptions.__eq__()
GeneAnnotationOptions.__hash__
GeneAnnotationOptions.__init__()
GeneAnnotationOptions.__repr__()
GeneAnnotationOptions.column_types
GeneAnnotationOptions.dtype
GeneAnnotationOptions.feature_column
GeneAnnotationOptions.skip
GeneAnnotationOptions.tiledb_store_name
MatrixOptions
MatrixOptions.matrix_name
MatrixOptions.matrix_attr_name
MatrixOptions.consolidate_duplicate_gene_func
MatrixOptions.skip
MatrixOptions.dtype
MatrixOptions.tiledb_store_name
MatrixOptions.__annotations__
MatrixOptions.__dataclass_fields__
MatrixOptions.__dataclass_params__
MatrixOptions.__eq__()
MatrixOptions.__hash__
MatrixOptions.__init__()
MatrixOptions.__repr__()
MatrixOptions.consolidate_duplicate_gene_func()
MatrixOptions.dtype
MatrixOptions.matrix_attr_name
MatrixOptions.matrix_name
MatrixOptions.skip
MatrixOptions.tiledb_store_name
SampleMetadataOptions
SampleMetadataOptions.skip
SampleMetadataOptions.dtype
SampleMetadataOptions.tiledb_store_name
SampleMetadataOptions.column_types
SampleMetadataOptions.__annotations__
SampleMetadataOptions.__dataclass_fields__
SampleMetadataOptions.__dataclass_params__
SampleMetadataOptions.__eq__()
SampleMetadataOptions.__hash__
SampleMetadataOptions.__init__()
SampleMetadataOptions.__repr__()
SampleMetadataOptions.column_types
SampleMetadataOptions.dtype
SampleMetadataOptions.skip
SampleMetadataOptions.tiledb_store_name
- cellarr.buildutils_tiledb_array module
- cellarr.buildutils_tiledb_frame module
- cellarr.dataloader module
- cellarr.queryutils_tiledb_frame module
- cellarr.utils_anndata module
- Module contents