genomicrangesΒΆ
- genomicranges package
- Subpackages
- Submodules
- genomicranges.GenomicRanges module
GenomicRanges
GenomicRanges.__copy__()
GenomicRanges.__deepcopy__()
GenomicRanges.__getitem__()
GenomicRanges.__init__()
GenomicRanges.__iter__()
GenomicRanges.__len__()
GenomicRanges.__repr__()
GenomicRanges.__setitem__()
GenomicRanges.binned_average()
GenomicRanges.copy()
GenomicRanges.count_overlaps()
GenomicRanges.coverage()
GenomicRanges.disjoin()
GenomicRanges.distance()
GenomicRanges.empty()
GenomicRanges.end
GenomicRanges.find_overlaps()
GenomicRanges.flank()
GenomicRanges.follow()
GenomicRanges.from_pandas()
GenomicRanges.from_polars()
GenomicRanges.gaps()
GenomicRanges.get_end()
GenomicRanges.get_mcols()
GenomicRanges.get_metadata()
GenomicRanges.get_names()
GenomicRanges.get_ranges()
GenomicRanges.get_seqinfo()
GenomicRanges.get_seqnames()
GenomicRanges.get_start()
GenomicRanges.get_strand()
GenomicRanges.get_subset()
GenomicRanges.get_width()
GenomicRanges.intersect()
GenomicRanges.intersect_ncls()
GenomicRanges.invert_strand()
GenomicRanges.match()
GenomicRanges.mcols
GenomicRanges.metadata
GenomicRanges.names
GenomicRanges.narrow()
GenomicRanges.nearest()
GenomicRanges.order()
GenomicRanges.precede()
GenomicRanges.promoters()
GenomicRanges.range()
GenomicRanges.ranges
GenomicRanges.rank()
GenomicRanges.reduce()
GenomicRanges.resize()
GenomicRanges.restrict()
GenomicRanges.sample()
GenomicRanges.seqinfo
GenomicRanges.seqnames
GenomicRanges.set_mcols()
GenomicRanges.set_metadata()
GenomicRanges.set_names()
GenomicRanges.set_ranges()
GenomicRanges.set_seqinfo()
GenomicRanges.set_seqnames()
GenomicRanges.set_strand()
GenomicRanges.set_subset()
GenomicRanges.setdiff()
GenomicRanges.shift()
GenomicRanges.sliding_windows()
GenomicRanges.sort()
GenomicRanges.split()
GenomicRanges.start
GenomicRanges.strand
GenomicRanges.subset_by_overlaps()
GenomicRanges.subtract()
GenomicRanges.tile()
GenomicRanges.tile_by_range()
GenomicRanges.tile_genome()
GenomicRanges.to_pandas()
GenomicRanges.to_polars()
GenomicRanges.trim()
GenomicRanges.union()
GenomicRanges.width
GenomicRangesIter
- genomicranges.GenomicRangesList module
GenomicRangesList
GenomicRangesList.__copy__()
GenomicRangesList.__deepcopy__()
GenomicRangesList.__getitem__()
GenomicRangesList.__init__()
GenomicRangesList.__iter__()
GenomicRangesList.__len__()
GenomicRangesList.__repr__()
GenomicRangesList.as_genomic_ranges()
GenomicRangesList.as_granges()
GenomicRangesList.copy()
GenomicRangesList.element_nrows()
GenomicRangesList.empty()
GenomicRangesList.end
GenomicRangesList.from_dict()
GenomicRangesList.generic_accessor()
GenomicRangesList.get_mcols()
GenomicRangesList.get_metadata()
GenomicRangesList.get_names()
GenomicRangesList.get_range_lengths()
GenomicRangesList.get_ranges()
GenomicRangesList.groups()
GenomicRangesList.is_circular
GenomicRangesList.is_empty()
GenomicRangesList.mcols
GenomicRangesList.metadata
GenomicRangesList.names
GenomicRangesList.range()
GenomicRangesList.range_lengths
GenomicRangesList.ranges
GenomicRangesList.seq_info
GenomicRangesList.seqnames
GenomicRangesList.set_mcols()
GenomicRangesList.set_metadata()
GenomicRangesList.set_names()
GenomicRangesList.set_ranges()
GenomicRangesList.start
GenomicRangesList.strand
GenomicRangesList.to_pandas()
GenomicRangesList.width
GenomicRangesListIter
- genomicranges.SeqInfo module
SeqInfo
SeqInfo.__copy__()
SeqInfo.__deepcopy__()
SeqInfo.__getitem__()
SeqInfo.__init__()
SeqInfo.__iter__()
SeqInfo.__len__()
SeqInfo.__repr__()
SeqInfo.copy()
SeqInfo.empty()
SeqInfo.genome
SeqInfo.get_genome()
SeqInfo.get_is_circular()
SeqInfo.get_seqlengths()
SeqInfo.get_seqnames()
SeqInfo.get_subset()
SeqInfo.is_circular
SeqInfo.seqlengths
SeqInfo.seqnames
SeqInfo.set_genome()
SeqInfo.set_is_circular()
SeqInfo.set_seqlengths()
SeqInfo.set_seqnames()
SeqInfoIterator
merge_SeqInfo()
- genomicranges.utils module
- Module contents