Summary

This book offers reproducible code snippets to assist users in working with BiocPy representations.

Beyond the representations detailed here, BiocPy also facilitates delayed operations and the analysis of multi-modal single-cell datasets in Python. BiocPy provides bindings to libscran and various other single-cell analysis methods incorporated into the scranpy package to support analysis of multi-modal single-cell datasets. It also features integration with the singleR algorithm to annotate cell types by matching cells to known references based on their expression profiles.

Check out the BiocPy GitHub organization for the most up-to-date information.

Core contributors